Search results for "Neuron type"

showing 2 items of 2 documents

An update to Hippocampome.org by integrating single-cell phenotypes with circuit function in vivo.

2021

Understanding brain operation demands linking basic behavioral traits to cell-type specific dynamics of different brain-wide subcircuits. This requires a system to classify the basic operational modes of neurons and circuits. Single-cell phenotyping of firing behavior during ongoing oscillations in vivo has provided a large body of evidence on entorhinal–hippocampal function, but data are dispersed and diverse. Here, we mined literature to search for information regarding the phase-timing dynamics of over 100 hippocampal/entorhinal neuron types defined in Hippocampome.org. We identified missing and unresolved pieces of knowledge (e.g., the preferred theta phase for a specific neuron type) a…

DYNAMICSGABAERGIC INTERNEURONPhysiologyAction PotentialsSocial SciencesHippocampal formationHippocampusNeuron typesBehavioral traitsMice0302 clinical medicineAnimal CellsMedicine and Health SciencesEntorhinal CortexPsychologyNETWORKBiology (General)Function (engineering)media_commonNeurons0303 health sciencesPHYSIOLOGICAL-PROPERTIESGeneral NeurosciencePyramidal CellsMethods and ResourcesBrainPhenotypeMOSSY CELLS3. Good healthElectrophysiologyPhenotypeAnatomyCellular TypesGeneral Agricultural and Biological SciencesGanglion CellsHeuristic (computer science)QH301-705.5media_common.quotation_subjectNeurophysiologyBiologyMembrane PotentialGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesAnimalsin vivo -menetelmähippokampus030304 developmental biologyBehaviorNeuron typeGeneral Immunology and MicrobiologyGranule CellsTHETA OSCILLATIONShermoverkot (biologia)Biology and Life SciencesCell BiologyNeuronal DendritesSILICON PROBESRatshermosolutBrain stateCellular Neuroscience1182 Biochemistry cell and molecular biologyfenotyyppi3111 BiomedicineNeuroscience030217 neurology & neurosurgeryNeurosciencePLoS biology
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OPETH: Open Source Solution for Real-Time Peri-Event Time Histogram Based on Open Ephys

2019

Single cell electrophysiology remains one of the most widely used approaches of systems neuroscience. Decisions made by the experimenter during electrophysiology recording largely determine recording quality, duration of the project and value of the collected data. Therefore, online feedback aiding these decisions can lower monetary and time investment, and substantially speed up projects as well as allow novel studies otherwise not possible due to prohibitively low throughput. Real-time feedback is especially important in studies that involve optogenetic cell type identification by enabling a systematic search for neurons of interest. However, such tools are scarce and limited to costly co…

Cell typeSpeedupComputer scienceBiomedical EngineeringNeuroscience (miscellaneous)peri-event time histogramOptogeneticsMachine learningcomputer.software_genreopen ephys050105 experimental psychologyNeuron typeslcsh:RC321-571Photostimulation03 medical and health sciencesSoftware0302 clinical medicineopen sourceHistogramMethods0501 psychology and cognitive sciencesoptogeneticslcsh:Neurosciences. Biological psychiatry. Neuropsychiatrycomputer.programming_language030304 developmental biologySystems neuroscience0303 health sciencesbusiness.industrybehavior05 social sciencesPattern recognitionPython (programming language)NeurophysiologyelectrophysiologyComputer Science ApplicationsElectrophysiologyOpen sourceCell electrophysiologyArtificial intelligencebusinesscomputer030217 neurology & neurosurgeryNeuroscienceFrontiers in Neuroinformatics
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